PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_38388
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 165aa    MW: 18406.8 Da    PI: 10.3984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_38388genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.35e-104170336
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36
                ++GVr +k +g+WvAeIr+p+   kr r++l  +
  PEQU_38388 41 FRGVRMRK-WGKWVAEIREPN---KRSRIWLRPY 70
                8*****99.**********93...3699999765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.0E-1940101IPR001471AP2/ERF domain
PROSITE profilePS5103215.0924095IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-194196IPR001471AP2/ERF domain
PRINTSPR003674.9E-84152IPR001471AP2/ERF domain
PfamPF008475.8E-54167IPR001471AP2/ERF domain
CDDcd000181.80E-174196No hitNo description
SuperFamilySSF541713.66E-124197IPR016177DNA-binding domain
PRINTSPR003674.9E-87797IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MEERKEERSL RPPPQPPLPS QQPLQPQPPP AAVAEGKERP FRGVRMRKWG KWVAEIREPN  60
KRSRIWLRPY FTPLAGARSF AVYPLRGRSA RLNFPDELDP EEATGGLTAE VNAASLSSAT  120
IRKKASEVGL RVDALQQQGL TAKSSRSCKN PDLNQQPSPE SSDDD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009387797.13e-48PREDICTED: ethylene-responsive transcription factor RAP2-9-like
SwissprotQ8LC302e-36RAP21_ARATH; Ethylene-responsive transcription factor RAP2-1
TrEMBLM0UCQ23e-48M0UCQ2_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP26940_0019e-48(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39433075
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.15e-37cooperatively regulated by ethylene and jasmonate 1